codeare1.2

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Installation guide

Ubuntu

Installing prerequisites

      > sudo apt-get install git build-essential fftw3-dev itk3-dev \
        libboost-dev libboost-system-dev libboost-thread-dev \
        libboost-program-options-dev libboost-timer-dev libnifti-dev \
        liblapack-dev libgsl0-dev omniorb-nameserver libomniorb4-dev \
        omniidl libatlas-dev libatlas-base-dev autoconf libtool \
	    libinsighttoolkit3-dev libhdf5-dev libnfft3-dev
    

ISMRMRD

Stronlgy suggested for building in ISMRMRD support

      > sudo apt-get install xsdcxx cmake swig libpython-dev\
        openjdk-7-jdk libxerces-c-dev python-numpy
      > git clone git://git.code.sf.net/p/ismrmrd/code ismrmrd
      > mkdir ismrmrd/build
      > cd ismrmrd/build
      > cmake ../
      > make 
      > sudo make install
    

All of the above amounts to some 300 packages and 350 MB. Without ISMRMRD support roughly 150 packges and 160 MB less.

Getting codeare

      > git clone http://github.com/kvahed/codeare.git codeare
    

Building codeare

Fairly easy (f.e. ubuntu with MATLAB 2012a at the default location)

      > cd codeare 
      > mkdir build
      > cd build
      > cmake .. -Wno-dev
      > make 
      > make test
      > cd ..
      > wget http://codeare.org/download/matlab_share.zip
        #if built with MATLAB support else:
      > wget http://codeare.org/download/hdf5_share.zip
      > unzip *_share.zip
      > cd build
      > make test
      > sudo make install